Index B | C | D | E | G | N | P | R | S | T B batch_correct() (in module cycombinepy) C check_confound() (in module cycombinepy) compute_emd() (in module cycombinepy) compute_mad() (in module cycombinepy) correct_data() (in module cycombinepy) create_som() (in module cycombinepy) D detect_batch_effect() (in module cycombinepy) detect_batch_effect_express() (in module cycombinepy) E evaluate_emd() (in module cycombinepy) evaluate_mad() (in module cycombinepy) G get_markers() (in module cycombinepy) N normalize() (in module cycombinepy) P plot_density() (in module cycombinepy.plotting) plot_dimred() (in module cycombinepy.plotting) plot_emd_heatmap() (in module cycombinepy.plotting) R read_fcs_dir() (in module cycombinepy.io) S scib_metrics() (in module cycombinepy.evaluate) T transform_asinh() (in module cycombinepy)